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ConnectorSeqera

Seqera integration for Claude and Codex

Create a Seqera connection, then control which Spaces can use its approved tools and data without pasting credentials into prompts or threads.

Use Seqera from Claude

Add the Seqera connection to a Space that runs Claude, then use it from every channel in that Space.

Use Seqera from Codex

Add the Seqera connection to a Space that runs Codex, then use it from every channel in that Space.

Use Seqera from Sidekick

Connect your own OpenClaw to Sidekick while Type provides the conversations, permissions, connections, skills, and automations.

Developer Tools & IT

What the Seqera connector can do

Seqera Platform is an intuitive, centralized command post that enables data analysis at scale, allowing users to launch, manage, and monitor scalable Nextflow pipelines and compute environments on-premises or across cloud providers.

One connection, many Spaces

Connect Seqera once, then decide which Spaces can use it in threads, skills, automations, and coding work.

Representative actions

  • Create Wave Container

    Tool to submit a request to Wave for accessing a private container registry or building a container image on-the-fly. Use when you need to provision containers via Wave with Dockerfile, Conda recipe, or package specifications. Returns the name of the container made available by Wave.

  • Get Organization Details

    Tool to retrieve detailed information about a specific organization.

  • Get Service Info

    Tool to retrieve information about the Seqera API service. Use when you need to check the service version and commit ID for troubleshooting.

  • Get User Info

    Tool to retrieve information about the authenticated user. Use when you need to fetch details of the current user after authentication.

  • Get Wave Build Logs

    Tool to get logs for a container build by build ID. Use when you need to troubleshoot or inspect the build process of a Wave container.

Connection

API and auth details

Seqera Platform exposes OpenAPI-described services for managing Nextflow workflows, compute environments, datasets, launches, workspaces, organizations, and monitoring data. Integrations can launch, manage, and observe scalable bioinformatics pipelines with bearer token authentication.

FAQ

Questions people ask before connecting Seqera

Can Claude use Seqera?

Yes. Add a Seqera connection to a Space that runs Claude, then use its approved tools and data from any channel in that Space.

Can Codex work with Seqera through Type?

Yes. Add a Seqera connection to a Space that runs Codex, then use its approved tools and data from any channel in that Space.

Is this the same as a Seqera MCP server?

Not exactly. Type uses connectors and connections to give selected Spaces access to approved app tools and data. Some connectors use hosted MCP, while others use OAuth, API keys, service accounts, or custom APIs.

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